Electron microscopy software

CryoDRGN ❄🐉

Our machine learning based approach to uncover and resolve structural heterogeneity in single particle cryo-EM datasets developed by Ph.D. student Ellen Zhong. Learn more here, and download here.

CryoCOUNT ❄🧮

Our model-based approach to analyze and interpret compositionally heterogeneous structural ensembles developed by Ph.D. student Laurel Kinman. Learn more about this approach to analyze subunit occupancy here, and download here.

em_scripts ❄💻

An ever growing repository of (potentially) useful helper scripts to munge electron microscopy data. Download here.

Mass spectrometry software

pyextractMS ⚖️⛏️

A repository of Python scripts to interact with mass spectrometry data stored in Thermo RAW format. Download here.

pysodist ⚖️🧮

A Pythonic implementation of isodist that allows for accurate fitting and quantitation of complex isotopic mass distributions within mass spectra. Download here.

msDataSheet ⚖️✅

A tool to rapidly generate datasheets to QC the performance of a mass spectrometer. Download here.